Add second example why caching changes is better than saving to database.
Version 0.8.1
Include feedback and suggestions from Philippine Louail.
Version 0.8.0
Add new tutorial Spectra: an expandable infrastructure to handle mass spectrometry data.
Download MassBank data as an alternative from AnnotationHub.
Version 0.7
Version 0.7.3
Fix mislabeling columns as experimental spectra and rows as MassBank spectra in the spectra similarity matrix (thanks to CSAMA2023 attendee for pointing this out!).
Version 0.7.2
Use MsBackendSql instead of MsqlBackend.
Version 0.7.1
Simplify/clarify description of spectra data processing.
Version 0.7.0
Add section on the use of the MsqlBackend and compare performance to MsBackendMzR and MsBackendDataFrame.
Version 0.6
Version 0.6.3
Better describe usage of the alternative SQLite MassBank database file in the two workshops.
Version 0.6.2
Add citation.
Version 0.6.1
Adapt to changes in Spectra >= 1.5.8: export spectraVariableMapping method.
Adapt to changes in CompoundDb >= 0.9.6: "target_name" is available as spectra variable in Spectra objects returned from a CompDb database.
Adapt to changes in MetaboAnnotation >= 0.99.4: also the ppm error is reported by matchMz.
Version 0.6.0
Remove the Spectra object with data from HMDB.
Use a CompDb database for HMDB annotations.
Version 0.5
Version 0.5.0
Add additional vignette describing spectra matching with the MetaboAnnotation package and integration into an xcms analysis workflow.
Version 0.4
Version 0.4.0
Version used at the BioC2021 conference.
Use MassBank release 2021.03.
Restructure the document and simplify the analysis (reduce to mzML files with 20eV collision energy).
Version 0.3
Version 0.3.2
Use MassBank release 2021.02 and add expand descriptive text.
